OnCo
bottlenecksBottleneck

Biomarkers are not validated or standardised

Tests that decide who gets a drug are often not validated prospectively and are measured differently in every lab.

Modern oncology allocates drugs by biomarker, but the biomarkers are held to a lower standard than the drugs. PD-L1 is scored with several non-interchangeable antibodies and cut-offs; HER2-low, which now defines eligibility for trastuzumab deruxtecan, depends on distinguishing IHC 0 from 1+, where pathologist agreement is poor; TMB varies by panel, bioinformatic pipeline and tumour type; HRD assays disagree with each other; and TROP2 and other ADC targets are given without any validated assay at all. Most biomarkers are validated retrospectively within the pivotal trial of one drug, on one assay, then used with different assays in practice. The consequences are patients wrongly included or excluded, irreproducible subgroup results, and combination biomarkers that never reach the clinic. Analytical standardisation, external quality assurance, prospective biomarker-stratified trials, and AI quantification that removes inter-observer variability are the remedies.

majortrials63 ideas to fix it
How big the problem is
26% agreement
Pathologist concordance in classifying HER2 IHC 0 vs 1+ (the HER2-low boundary) across 18 pathologists
3 concordant, 1 discordant
PD-L1 assays in the Blueprint comparison project whose tumour-cell staining was interchangeable (22C3, 28-8, SP263) vs discordant (SP142)
Root causes
  • Each drug sponsor develops its own companion assay and cut-off, with no obligation to harmonise.
  • Immunohistochemistry is semi-quantitative and subject to pre-analytical variation and inter-observer disagreement.
  • Retrospective validation within a single trial is accepted by regulators as sufficient.
  • External quality assurance schemes are voluntary in many countries.
  • Reimbursement for testing lags approval, so laboratories adopt cheaper, non-validated substitutes.
What is already being tried
  • The Blueprint PD-L1 IHC Assay Comparison Project and Friends of Cancer Research TMB Harmonization Project align assays across vendors.
  • The ASCO-CAP HER2 guideline update (2023) added HER2-low reporting standards, and AI-assisted HER2 scoring is being validated to reduce inter-observer variability.
  • NordiQC and UK NEQAS run external quality assessment for immunohistochemistry and molecular pathology.
  • The EU In Vitro Diagnostic Regulation (IVDR) raises evidence requirements for companion diagnostics.
  • FoundationOne CDx and other pan-tumour companion diagnostics consolidate multiple biomarkers on one validated platform.
  • TROP2 PET and other quantitative imaging biomarkers are being developed as alternatives to tissue IHC for ADC target selection.
What breaking it looks like
Every biomarker used to allocate a drug has a harmonised assay with published analytical validation, participates in mandatory external quality assurance, and produces the same treatment decision for the same sample in any accredited laboratory.

Ideas to fix it

63top
early clinicalresearchmedium cost
A biomarker-directed trial of vitamin D after surgery for digestive tract cancers

A Japanese trial found vitamin D supplements did not help everyone after digestive cancer surgery, but appeared to help a subgroup identified by a tumour marker. That subgroup deserves its own trial.

speculativeresearchmedium cost
A blood test for the pre-metastatic niche

Before cancer spreads, distant organs are changed to become welcoming. A test for those changes would show which organ is at risk while a person still looks cancer-free.

preclinical evidenceresearchmedium cost
A breath test to rule out cancer in people with vague symptoms

Volatile compounds in breath differ in cancer. A breath test validated in truly symptomatic patients, not lab volunteers, could tell GPs who needs urgent scans and who can safely wait.

early clinicaldatamedium cost
A commons for leftover trial biospecimens with standard access for approved research

Blood and tissue samples collected in cancer trials are the best material for validating new tests, but most sit unused under contracts that make access impossible. A commons would make them available for approved research.

early clinicalregulatorsmall cost
A formal regulatory route for validating a biomarker on archived trial samples

Completed trials have stored samples. Testing a new biomarker on them with the plan written in advance is nearly as good as a new trial and far cheaper, but regulators have no clear route to accept it.

preclinical evidenceresearchmedium cost
A functional test for homologous recombination deficiency validated across laboratories

Tests for 'HRD', which decide who gets PARP inhibitors, rely on genomic scars that reflect the tumour's past, not its present. A test of current DNA-repair function would be better, but needs standardising.

speculativephilanthropymedium cost
A fund for prospective validation of academic biomarkers and companion diagnostics

Thousands of tests that could predict who benefits from a treatment are published and never validated. A fund would pay for the boring but essential confirmation studies in independent patient groups.

early clinicaldatalarge cost
A public biomarker validation utility with pre-diagnostic biobanks and blinded testing

Thousands of cancer biomarkers are published; almost none reach patients because nobody validates them fairly. Create a public service that tests any candidate blind against stored samples.

speculativeregulatorsmall cost
A reliance pathway for companion diagnostics so the test arrives with the drug

Targeted cancer drugs often reach a country years before the test needed to select patients is approved there. Recognising other regulators' test approvals would close the gap.

early clinicalresearchmedium cost
A short pre-surgery drug window as the default early test of new agents

Between diagnosis and surgery there are usually a few weeks. Giving a new drug in that window and comparing the tumour before and after surgery shows whether it hits its target in real people, quickly and cheaply.

early clinicalindustrysmall cost
A single calibrated tumour mutational burden across all sequencing panels

Tumour mutational burden decides who gets immunotherapy in some settings, but every sequencing panel calculates it differently. A shared calibration would make the number mean the same thing everywhere.

preclinical evidenceresearchmedium cost
A standard evolvability score for every tumour

Some tumours change fast and escape drugs quickly; others are stable. A single validated score for how evolvable a tumour is would tell doctors how aggressively to combine treatments.

speculativeresearchmedium cost
A survivor biobank to find who will develop late effects before they do

Two people can have identical treatment and only one develops heart failure or a second cancer years later. Collecting blood and genetic data from survivors could reveal who is at risk and who can be reassured.

early clinicalresearchmedium cost
A test to tell true oligometastatic disease from hidden widespread spread

Some people have only a few spots of spread and can be cured by treating each one. Others have many spots not yet visible. A test to tell them apart would spare futile treatment and find curable patients.

early clinicalregulatorsmall cost
An annual blinded shoot-out for liquid biopsy tests

Once a year, send the same blinded blood samples to every company selling a tumour-DNA test and publish how each performed.

early clinicalresearchmedium cost
An independent programme that validates surrogate endpoints, setting by setting

Trials often measure a stand-in for survival, such as time until the cancer grows on scans. An independent body would test, for each cancer and treatment type, whether the stand-in actually predicts survival, and publish the answer.

early clinicalregulatorsmall cost
Calibrated reference slides so every lab scores HER2-low the same way

Whether a breast cancer counts as 'HER2-low', and so qualifies for a powerful drug, depends on which lab reads the slide. Standard reference slides with known HER2 levels would make the answer consistent.

early clinicalregulatorsmall cost
Certified reference samples to benchmark every tumour-DNA blood test

Dozens of companies sell blood tests for tumour DNA and they report different results on the same sample. Government-issued reference samples with known amounts of tumour DNA would expose the differences.

preclinical evidenceresearchmedium cost
Check whether a tumour can still show itself to the immune system

Some tumours have broken the machinery that displays their identity to immune cells. Those patients cannot benefit from most immunotherapy and should be routed elsewhere.

early clinicalindustrymedium cost
Circulating tumour cell clearance as the phase 2 gate for anti-metastatic drugs

Cancer cells travelling in the blood can be counted. If a drug clears them, that is an early sign it may stop spread, and it reads out in weeks rather than years.

speculativeregulatorsmall cost
Drug labels must state which biomarker assays were validated and how they compare

A drug label says 'for PD-L1 positive patients' but does not say that other tests give different answers. Labels should list the validated tests and how much they disagree.

early clinicalregulatormedium cost
Formally qualify tumour-DNA blood tests as a surrogate endpoint for adjuvant trials

If a blood test reliably shows whether cancer will come back after surgery, trials could use it instead of waiting years for relapse. Regulators have a process to bless such a test; oncology should use it.

preclinical evidenceregulatorsmall cost
Hold organoid drug tests to the same standard as a diagnostic test

Lab-grown mini-tumours are already being sold to guide treatment, but the tests are not validated like other medical tests. They should be.

speculativeresearchsmall cost
Label every biomarker claim with an evidence phase, like drugs

Drugs are described as phase 1, 2 or 3 so everyone knows how proven they are. Biomarkers should carry the same kind of label so a 'promising' marker is not mistaken for a validated one.

preclinical evidencedatasmall cost
Label every targetable mutation as truncal or branch on the report

A drug aimed at a mutation present in every tumour cell works differently from one aimed at a mutation in only some cells. Test reports should say which is which.

early clinicalresearchmedium cost
Link single-cell and spatial tumour atlases to clinical outcomes

The detailed molecular maps of tumours being built today mostly lack information on what happened to the patient. Require every atlas sample to carry consented outcome data.

early clinicalregulatorsmall cost
Lock the biomarker cut-off before phase 3, and publish it

Companies sometimes choose the biomarker threshold that makes their trial look best after seeing the data. Requiring the threshold to be fixed and published before the big trial starts prevents this.

speculativeregulatorsmall cost
Mandatory interval-cancer audit for every blood-based screening test

When a screening test misses a cancer, we should know. Linking every negative result to the cancer registry and publishing what was missed, by stage, should be a condition of use.

speculativeresearchmedium cost
Match therapy to the type of scar-forming cell in the tumour

The support cells that build a tumour's scaffolding come in several types: some protect the tumour, others restrain it. Treating all of them the same way explains past failures.

preclinical evidenceresearchmedium cost
Molecular indolence classifiers bundled with every screening programme

Screening finds cancers that would never have caused harm alongside dangerous ones. Pair every screening test with a test that says which is which, so people with harmless findings can safely watch and wait.

speculativedatasmall cost
Monitor biomarker positivity rates across labs in real time to catch assay drift

If one lab suddenly starts finding twice as many 'positive' results as others, something has gone wrong with its test. Pooling positivity rates across labs would catch this automatically.

early clinicalresearchsmall cost
No clinical claims for imaging-derived biomarkers without phantom and standards compliance

Thousands of papers extract 'radiomic' features from scans to predict outcomes, but the features change with scanner settings. Journals should require standard compliance before any clinical claim is made.

early clinicalresearchmedium cost
One digital PD-L1 scale that maps across all the competing assays

There are several different PD-L1 tests, each tied to a different drug, and they disagree. A single digitally calibrated scale would let any lab's result be translated into any drug's cut-off.

being tested at scaleclinicmedium cost
Pathologists order genomic profiling automatically at diagnosis of advanced cancer

Many patients with advanced lung or bowel cancer start treatment without the gene tests that would show whether a targeted drug would work. Let the pathologist order the full test the moment cancer is confirmed, without waiting for an oncologist.

early clinicalpayermedium cost
Pay for new biomarker tests only while evidence of clinical utility is being collected

Insurers pay for many cancer tests that have never been shown to improve outcomes. Paying only inside studies that measure whether the test helps would sort the useful from the useless.

speculativepolicysmall cost
Pre-register biomarker validation studies the way trials are registered

Drug trials must be registered before they start so results cannot be hidden or reshaped. Studies that claim a biomarker predicts outcome should be registered too.

early clinicaldatamedium cost
Public gold-standard datasets for validating every cancer biomarker test

Anyone building a new test for HER2, PD-L1 or tumour DNA should be able to check it against the same public reference set. Today each developer validates on private data nobody can inspect.

early clinicalregulatorsmall cost
Publish each laboratory's biomarker proficiency results

Labs already get tested on whether they score biomarkers correctly, but the results are private. Publishing them would let hospitals and patients avoid labs that get it wrong.

early clinicalregulatorsmall cost
Publish the disagreement between trial doctors and independent reviewers for every trial

Trials often have independent radiologists check whether tumours grew. How often they disagree with the treating doctors is a measure of how trustworthy the result is, and it is rarely published.

early clinicaldatamedium cost
Push residual disease detection a hundredfold deeper with whole-genome methods

Current blood tests miss leftover cancer in many patients. Reading thousands of mutations at once, rather than a few dozen, can detect far smaller amounts.

early clinicalresearchmedium cost
Qualify PSMA PET tumour volume as a validated imaging biomarker

PSMA scans could measure prostate cancer burden and response far better than PSA, but no one has done the standardisation work to make the measurement trustworthy across scanners.

early clinicalresearchlarge cost
Randomised trials to test whether biomarker-negative patients really do not benefit

Many patients are denied a drug because a test says they will not benefit. For the most important tests, that assumption should itself be tested in a trial.

early clinicalclinicsmall cost
Read the spinal fluid to track brain tumours without opening the skull

Fluid taken from the lower back contains DNA from brain tumours. Testing it can diagnose, monitor and detect resistance without brain surgery.

speculativeclinicsmall cost
Record how long tissue waited before fixation in every pathology report

How a tissue sample is handled before it reaches the lab changes the results of biomarker tests. That handling time is almost never recorded, so nobody can tell a true negative from a spoiled sample.

speculativeregulatorsmall cost
Reference materials and open proficiency testing for residual disease tests

Different companies' leftover-cancer blood tests disagree, and there is no shared yardstick. Public reference samples would let anyone check which test actually works.

speculativeregulatorsmall cost
Regulators recognise each other's companion diagnostic approvals

A test approved to select patients for a drug in the US must go through separate approval in Europe, Japan and elsewhere, delaying the drug. Accepting each other's test approvals would fix the delay.

early clinicalresearchmedium cost
Rescue the biological samples from failed trials for biomarker research

Trials that fail still collected thousands of blood and tissue samples. Instead of being destroyed, they should be pooled so scientists can learn who might have benefited.

early clinicalresearchmedium cost
Run the mouse or organoid trial at the same time as the human trial

Instead of testing a drug in lab models first and hoping the results carry over, build the same models from trial participants and run both experiments in parallel to see how well the models predict.

speculativeindustrysmall cost
Select cachexia trial patients by the hormone driving their wasting

Wasting has several causes. Measuring the specific hormone in each patient's blood would put the right patients into the right trial instead of mixing everyone together.

preclinical evidenceindustrymedium cost
Select patients for cell therapy by whether their tumour holds reactive T cells

Growing a patient's own tumour-fighting cells only works if those cells are there to start with. A test for them would spare futile treatment.

preclinical evidenceresearchmedium cost
Standards for spatial and multiplex tissue biomarkers before they reach the clinic

New microscopes can measure dozens of proteins at once and map where immune cells sit in a tumour. These readouts could predict immunotherapy response, but every lab does it differently.

being tested at scaleclinicsmall cost
Standing reflex biomarker panels per tumour type, run without an oncologist's order

For each cancer type, agree the set of stains and tests that are always needed, and have the lab run them automatically on diagnosis rather than waiting for someone to ask.

early clinicalindustrymedium cost
Starve MYC-driven tumours by blocking protein production machinery

Cancers driven by MYC need to make proteins at an unusually fast rate. Slowing the cell's protein factory hits them harder than it hits normal cells.

preclinical evidenceresearchsmall cost
Take the blood test, and give the drug, at the right time of day

Cancer cells enter the blood mostly during rest, so a morning blood test may miss them. Sampling and dosing at the right hour may be a free improvement.

early clinicalclinicmedium cost
Test drugs on the patient's own cancer cells when there is no trial to join

For very rare cancers there is often no genetic clue and no trial. Growing the patient's cells and testing drugs on them directly can suggest what to try.

preclinical evidencephilanthropymedium cost
Test every possible mutation in every cancer gene so no result is 'uncertain'

Many people get a genetic result of uncertain significance, which cannot be acted on. Lab methods now let us test every possible variant in a gene in advance.

early clinicalregulatormedium cost
Test the drug in biomarker-negative patients too, so the biomarker can be validated

Trials that only enrol patients with a positive biomarker can never prove the biomarker matters. Including a smaller biomarker-negative group would show whether the test is really needed.

early clinicalindustrymedium cost
Turn the map of immune cells inside a tumour into a standardised test

Whether immune cells are next to cancer cells matters more than how many there are. Turning that spatial picture into a reliable, standardised test would predict response better.

early clinicalindustrymedium cost
Use a hypoxia scan to pick patients for adenosine-pathway drugs

Tumours starved of oxygen produce a chemical that switches immune cells off. A scan can show which tumours are starved, and those are the ones to treat with blockers.

preclinical evidenceresearchsmall cost
Use SLFN11 status to decide which antibody-drug payload to give next

A single protein predicts whether a tumour will respond to DNA-damaging drug payloads. Measuring it could stop patients receiving a second drug of the same kind that will not work.

early clinicaldatamedium cost
Validate real-world progression endpoints so pragmatic trials can use them

Pragmatic trials want to use the progression dates recorded in ordinary clinic notes instead of expensive protocol scans. Checking how well those routine records match formal trial measurements would show when that shortcut is safe.

early clinicalregulatorsmall cost
Version control and locked reference sets for AI algorithms used as companion diagnostics

AI is starting to decide which patients get which cancer drug. Every change to the software should be tested against a fixed public set of cases before it is used on patients.

early clinicaldatamedium cost
Watch the immune system's response in the blood three weeks in

When immunotherapy works, specific immune cell families multiply in the blood within weeks. Tracking that could tell patients early whether to continue.

Key papers

23top
rctNew England Journal of Medicine 2025changed practice
CheckMate 067 at ten years: nivolumab plus ipilimumab produces long-term survival in half of patients with advanced melanoma

For patients with advanced melanoma, immunotherapy offers a realistic chance of long-term survival and probably cure, and the ten-year data show that patients who are alive and progression-free at three years rarely die of melanoma afterwards. Nivolumab plus ipilimumab gives the best long-term results but at a high price in serious side effects; nivolumab alone or nivolumab plus relatlimab are alternatives for patients at lower risk or with autoimmune concerns. The trial is also a caution about surrogate endpoints: the survival plateau took years to become visible.

rctNew England Journal of Medicine 2025changed practice
IMvigor011: using a blood test for leftover cancer to decide who gets immunotherapy after bladder surgery

After bladder removal, a blood test can now tell who needs immunotherapy and who can safely be spared it. This is the model for MRD-guided adjuvant therapy across cancers: treat the blood-positive, watch the blood-negative.

rctNew England Journal of Medicine 2024changed practice
DESTINY-Breast06: trastuzumab deruxtecan before any chemotherapy in hormone-receptor-positive, HER2-low or ultralow breast cancer

Patients with hormone-receptor-positive metastatic breast cancer that has stopped responding to endocrine therapy can be offered trastuzumab deruxtecan as their first chemotherapy-type treatment if the tumour shows any HER2 staining, rather than waiting until after conventional chemotherapy. Whether to use it before or after chemotherapy is now a choice, since overall survival was not shown to differ and the drug carries a risk of lung inflammation.

rctJournal of Clinical Oncology 2024
TROPION-Breast01: datopotamab deruxtecan versus chemotherapy in pretreated hormone-receptor-positive breast cancer, and why a PFS win did not translate to survival

For hormone-receptor-positive metastatic breast cancer that has already had chemotherapy, Dato-DXd controls the disease for longer with fewer severe side effects than chemotherapy, but does not help patients live longer, so it is not a standard option here. The result is a reminder that progression-free survival is a surrogate; regulators and clinicians should wait for survival data before adopting an ADC in a setting where later therapies are effective.

observationalNature Medicine 2023
GALAXY: tumour DNA in blood four weeks after bowel cancer surgery predicts relapse tenfold

The blood test stratifies risk far better than stage or pathology. It supports treating ctDNA-positive patients and suggests ctDNA-negative patients gain little from chemotherapy, but because treatment was not randomised the de-escalation claim needs the randomised trials that are now under way.

observationalThe Lancet 2023
PATHFINDER: the first prospective test of a multi-cancer blood test in people without symptoms

A multi-cancer blood test can be run in ordinary clinics, and most positive results can be resolved with imaging. But six in ten positives are false alarms that take months to resolve, and the test misses most cancers. Whether it reduces late-stage cancer or deaths is unknown; that requires randomised trials.

rctNew England Journal of Medicine 2023changed practice
RUBY: dostarlimab with chemotherapy for advanced or recurrent endometrial cancer

Women with newly diagnosed advanced or recurrent endometrial cancer should receive a PD-1 antibody (dostarlimab or pembrolizumab) with their chemotherapy, and mismatch repair testing is now essential because women with dMMR tumours gain a very large and durable benefit. The gain in mismatch-repair-proficient tumours is real but smaller, and molecular classification (POLE, p53, MMR) is increasingly used to decide who benefits most.

rctThe Lancet 2023changed practice
SPOTLIGHT: zolbetuximab, the first Claudin 18.2 antibody, added to chemotherapy in gastric cancer

Patients with newly diagnosed advanced stomach cancer should now have Claudin 18.2 tested alongside HER2, PD-L1 and mismatch repair, because roughly a third will be eligible for zolbetuximab, which adds about three months of median survival. The main practical problem is nausea and vomiting during infusions, which needs aggressive prophylaxis. How to sequence or combine it with immunotherapy in PD-L1-positive tumours is unresolved.

rctNew England Journal of Medicine 2022changed practice
DESTINY-Breast04: trastuzumab deruxtecan works in HER2-low breast cancer, creating a new treatable group

Patients whose breast cancer was previously called HER2-negative may now be eligible for an effective HER2-directed drug if their tumour has even low-level HER2 staining, so pathology reports must now distinguish HER2-low (1+ or 2+/ISH-negative) from HER2-zero. This applies to metastatic disease after at least one line of chemotherapy; it does not mean these patients benefit from trastuzumab or other older HER2 drugs.

rctNew England Journal of Medicine 2022changed practice
POLARIX: swapping vincristine for the antibody-drug conjugate polatuzumab vedotin in first-line treatment of diffuse large B-cell lymphoma

POLARIX gave the first new first-line standard for DLBCL since rituximab was added to CHOP, and pola-R-CHP is now approved and widely used, especially in higher-risk or ABC-type disease. The gain is modest and survival is unchanged, so many clinicians still use R-CHOP in lower-risk or GCB-type patients. Cost and subgroup uncertainty drive ongoing debate.

rctThe Lancet 2021changed practice
CheckMate 649: nivolumab plus chemotherapy as first treatment for advanced gastric, gastro-oesophageal junction and oesophageal adenocarcinoma

Patients with newly diagnosed advanced stomach or oesophageal adenocarcinoma whose tumour is HER2-negative and PD-L1 positive (CPS 5 or more, or at least 1 in some regions) should receive chemotherapy with nivolumab (or pembrolizumab, from KEYNOTE-859), which adds about three months of median survival and doubles the chance of being alive at three years. The benefit in PD-L1-negative tumours is doubtful, and these patients may be better served by chemotherapy alone or by trials.

rctNew England Journal of Medicine 2020changed practice
KEYNOTE-177: pembrolizumab instead of chemotherapy as first treatment for mismatch-repair-deficient metastatic colorectal cancer

Every colorectal cancer should be tested for mismatch repair deficiency, because patients whose metastatic tumour is dMMR should receive pembrolizumab rather than chemotherapy as first treatment, gaining a much better chance of durable remission with fewer side effects. About a third of dMMR tumours do not respond initially, so early scans are essential and chemotherapy remains available. The trial does not apply to the 95% of colorectal cancers that are mismatch-repair proficient.

rctThe Lancet 2019changed practice
KEYNOTE-048: pembrolizumab, alone or with chemotherapy, as first treatment for recurrent or metastatic head and neck cancer

Patients with head and neck squamous cell cancer that has recurred or spread should be treated first with pembrolizumab: alone if their tumour is strongly PD-L1 positive and they can wait for a slower response, or with chemotherapy if the tumour is bulky or PD-L1 low. Cetuximab-based chemotherapy is no longer the default. Long-term follow-up shows a small but real group of patients alive at four to five years, which was almost unheard of before.

rctNew England Journal of Medicine 2019changed practice
PAOLA-1: olaparib added to bevacizumab maintenance in newly diagnosed ovarian cancer, with benefit confined to HRD-positive tumours

Women with newly diagnosed advanced ovarian cancer should have their tumour tested for BRCA mutations and homologous recombination deficiency, because those who are HRD-positive gain years of additional disease control and better survival from adding olaparib to bevacizumab maintenance. Those who are HRD-negative gain nothing from olaparib in this combination and should not be exposed to its toxicity and cost. HRD testing has become a routine part of ovarian cancer care as a result.

rctNew England Journal of Medicine 2018changed practice
KEYNOTE-189: pembrolizumab plus chemotherapy as first treatment for non-squamous lung cancer without a driver mutation

Most patients with newly diagnosed advanced non-squamous lung cancer that lacks a targetable mutation should receive chemotherapy plus pembrolizumab; those with PD-L1 of 50% or more may reasonably receive pembrolizumab alone. About one in five patients is alive at five years, compared with roughly one in ten with chemotherapy alone. Patients with EGFR or ALK alterations were excluded and should have targeted therapy first.

translationalScience 2017changed practice
Le 2017: mismatch-repair deficiency predicts response to PD-1 blockade across twelve tumour types, leading to the first tissue-agnostic drug approval

This paper established a new regulatory paradigm: a drug approved for a molecular feature regardless of organ. It made MSI/MMR testing standard across advanced cancers and remains the clearest example of a biomarker that works across histologies. It also anchored the idea that mutation load, via neoantigens, is what makes tumours visible to T cells.

rctNew England Journal of Medicine 2017changed practice
PACIFIC: a year of durvalumab after chemoradiotherapy for stage III lung cancer

Patients with stage III lung cancer that cannot be removed surgically should receive a year of durvalumab after completing chemoradiotherapy, provided they have not progressed. This roughly doubles the chance of being alive without progression at five years. Whether the benefit extends to PD-L1-negative tumours is contested, and the EGFR-mutated subgroup is better served by osimertinib (LAURA).

translationalNew England Journal of Medicine 2015changed practice
Le 2015: PD-1 blockade works in tumours with mismatch-repair deficiency, whatever the organ

This small trial explained why colorectal cancer had seemed immune-resistant (most is MMR-proficient) and established the principle that a genomic feature, not the tissue of origin, can predict immunotherapy response. It led directly to the 2017 tissue-agnostic approval of pembrolizumab and to routine MMR/MSI testing of many cancers. Every patient with advanced dMMR cancer should now be considered for checkpoint blockade.

basicScience 2015
Martincorena: normal sun-exposed skin is a patchwork of cancer-mutation clones

Carrying a cancer mutation is normal; most mutant clones never become cancer. This means blood or tissue tests that look for driver mutations alone will produce false positives, and that the question of what tips a mutant clone into cancer (tissue environment, further hits, immune surveillance) is as important as the mutation itself.

observationalNew England Journal of Medicine 2014
Jaiswal: clonal haematopoiesis, the pre-leukaemic clones in most people over 70

Many older people carry blood clones one or two steps from leukaemia, and those clones also drive heart disease through inflammation. CHIP is why blood-based cancer tests must filter out mutations from blood cells, and it opens a route to preventing both leukaemia and cardiovascular events in carriers.

translationalNew England Journal of Medicine 2012
Gerlinger: a single biopsy misses most of the mutations in a kidney tumour

A single biopsy is an incomplete picture of a patient's cancer. Truncal mutations shared by all cells (in kidney cancer, VHL) are the most reliable drug targets, whereas mutations in only some branches predict resistance. This is why liquid biopsy and multi-region sampling matter.

translationalNew England Journal of Medicine 2012changed practice
Topalian 2012: the first large trial of a PD-1 antibody shows durable responses across melanoma, lung and kidney cancer

This study is why PD-1 inhibitors were developed across cancers rather than in melanoma alone: unexpected activity in lung cancer, historically thought immune-resistant, changed drug development priorities industry-wide. It also introduced PD-L1 immunohistochemistry as a candidate biomarker and pneumonitis as a signature toxicity. Within five years PD-1 blockade was approved in more than ten cancers.

basicPNAS 2002
Iwai and Honjo: tumours use PD-L1 to escape T cells, and blocking it restores attack

Tumours hide from T cells by displaying PD-L1; blocking that interaction lets the immune system attack. This is the mechanism of pembrolizumab, nivolumab, atezolizumab and their relatives, which now treat more than 20 cancer types.

Connected

124top

cancers

6

technologies

7

targets

4

drugs

2

companies

4

institutions

1

terms

9

trials

2

ideas

65
A biomarker-directed trial of vitamin D after surgery for digestive tract cancersA blood test for the pre-metastatic nicheA breath test to rule out cancer in people with vague symptomsA commons for leftover trial biospecimens with standard access for approved researchA formal regulatory route for validating a biomarker on archived trial samplesA functional test for homologous recombination deficiency validated across laboratoriesA fund for prospective validation of academic biomarkers and companion diagnosticsA public biomarker validation utility with pre-diagnostic biobanks and blinded testingA reliance pathway for companion diagnostics so the test arrives with the drugA short pre-surgery drug window as the default early test of new agentsA single calibrated tumour mutational burden across all sequencing panelsA standard evolvability score for every tumourA survivor biobank to find who will develop late effects before they doA test to tell true oligometastatic disease from hidden widespread spreadAI quantification of HER2-low and HER2-ultralowAn annual blinded shoot-out for liquid biopsy testsAn independent programme that validates surrogate endpoints, setting by settingCalibrated reference slides so every lab scores HER2-low the same wayCertified reference samples to benchmark every tumour-DNA blood testCheck whether a tumour can still show itself to the immune systemCirculating tumour cell clearance as the phase 2 gate for anti-metastatic drugsDrug labels must state which biomarker assays were validated and how they compareFormally qualify tumour-DNA blood tests as a surrogate endpoint for adjuvant trialsHold organoid drug tests to the same standard as a diagnostic testLabel every biomarker claim with an evidence phase, like drugsLabel every targetable mutation as truncal or branch on the reportLink single-cell and spatial tumour atlases to clinical outcomesLock the biomarker cut-off before phase 3, and publish itMandatory interval-cancer audit for every blood-based screening testMatch therapy to the type of scar-forming cell in the tumourMolecular indolence classifiers bundled with every screening programmeMonitor biomarker positivity rates across labs in real time to catch assay driftNo clinical claims for imaging-derived biomarkers without phantom and standards complianceOne digital PD-L1 scale that maps across all the competing assaysPathologists order genomic profiling automatically at diagnosis of advanced cancerPay for new biomarker tests only while evidence of clinical utility is being collectedPre-register biomarker validation studies the way trials are registeredPublic gold-standard datasets for validating every cancer biomarker testPublish each laboratory's biomarker proficiency resultsPublish the disagreement between trial doctors and independent reviewers for every trialPush residual disease detection a hundredfold deeper with whole-genome methodsQualify PSMA PET tumour volume as a validated imaging biomarkerRandomised trials to test whether biomarker-negative patients really do not benefitRead the spinal fluid to track brain tumours without opening the skullRecord how long tissue waited before fixation in every pathology reportReference materials and open proficiency testing for residual disease testsRegulators recognise each other's companion diagnostic approvalsRescue the biological samples from failed trials for biomarker researchRun the mouse or organoid trial at the same time as the human trialSelect cachexia trial patients by the hormone driving their wastingSelect patients for cell therapy by whether their tumour holds reactive T cellsStandards for spatial and multiplex tissue biomarkers before they reach the clinicStanding reflex biomarker panels per tumour type, run without an oncologist's orderStarve MYC-driven tumours by blocking protein production machineryTake the blood test, and give the drug, at the right time of dayTest drugs on the patient's own cancer cells when there is no trial to joinTest every possible mutation in every cancer gene so no result is 'uncertain'Test the drug in biomarker-negative patients too, so the biomarker can be validatedTROP2 PET to choose and sequence TROP2 ADCsTurn the map of immune cells inside a tumour into a standardised testUse a hypoxia scan to pick patients for adenosine-pathway drugsUse SLFN11 status to decide which antibody-drug payload to give nextValidate real-world progression endpoints so pragmatic trials can use themVersion control and locked reference sets for AI algorithms used as companion diagnosticsWatch the immune system's response in the blood three weeks in

collections

1

key papers

23
CheckMate 067 at ten years: nivolumab plus ipilimumab produces long-term survival in half of patients with advanced melanomaCheckMate 649: nivolumab plus chemotherapy as first treatment for advanced gastric, gastro-oesophageal junction and oesophageal adenocarcinomaDESTINY-Breast04: trastuzumab deruxtecan works in HER2-low breast cancer, creating a new treatable groupDESTINY-Breast06: trastuzumab deruxtecan before any chemotherapy in hormone-receptor-positive, HER2-low or ultralow breast cancerGALAXY: tumour DNA in blood four weeks after bowel cancer surgery predicts relapse tenfoldGerlinger: a single biopsy misses most of the mutations in a kidney tumourIMvigor011: using a blood test for leftover cancer to decide who gets immunotherapy after bladder surgeryIwai and Honjo: tumours use PD-L1 to escape T cells, and blocking it restores attackJaiswal: clonal haematopoiesis, the pre-leukaemic clones in most people over 70KEYNOTE-048: pembrolizumab, alone or with chemotherapy, as first treatment for recurrent or metastatic head and neck cancerKEYNOTE-177: pembrolizumab instead of chemotherapy as first treatment for mismatch-repair-deficient metastatic colorectal cancerKEYNOTE-189: pembrolizumab plus chemotherapy as first treatment for non-squamous lung cancer without a driver mutationLe 2015: PD-1 blockade works in tumours with mismatch-repair deficiency, whatever the organLe 2017: mismatch-repair deficiency predicts response to PD-1 blockade across twelve tumour types, leading to the first tissue-agnostic drug approvalMartincorena: normal sun-exposed skin is a patchwork of cancer-mutation clonesPACIFIC: a year of durvalumab after chemoradiotherapy for stage III lung cancerPAOLA-1: olaparib added to bevacizumab maintenance in newly diagnosed ovarian cancer, with benefit confined to HRD-positive tumoursPATHFINDER: the first prospective test of a multi-cancer blood test in people without symptomsPOLARIX: swapping vincristine for the antibody-drug conjugate polatuzumab vedotin in first-line treatment of diffuse large B-cell lymphomaRUBY: dostarlimab with chemotherapy for advanced or recurrent endometrial cancerSPOTLIGHT: zolbetuximab, the first Claudin 18.2 antibody, added to chemotherapy in gastric cancerTopalian 2012: the first large trial of a PD-1 antibody shows durable responses across melanoma, lung and kidney cancerTROPION-Breast01: datopotamab deruxtecan versus chemotherapy in pretreated hormone-receptor-positive breast cancer, and why a PFS win did not translate to survival